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Detection and correction of cardiac MRI motion artefacts during reconstruction from k-space

  • Ilkay Oksuz*
  • , James Clough
  • , Bram Ruijsink
  • , Esther Puyol-Antón
  • , Aurelien Bustin
  • , Gastao Cruz
  • , Claudia Prieto
  • , Daniel Rueckert
  • , Andrew P. King
  • , Julia A. Schnabel
  • *Bu çalışma için yazışmadan sorumlu yazar
  • King's College London
  • Guy's and St Thomas' NHS Foundation Trust
  • Imperial College London

Araştırma sonucu: Kitap/Rapor/Konferans Bildirisinde BölümKonferans katkısıbilirkişi

17 Atıf (Scopus)

Özet

In fully sampled cardiac MR (CMR) acquisitions, motion can lead to corruption of k-space lines, which can result in artefacts in the reconstructed images. In this paper, we propose a method to automatically detect and correct motion-related artefacts in CMR acquisitions during reconstruction from k-space data. Our correction method is inspired by work on undersampled CMR reconstruction, and uses deep learning to optimize a data-consistency term for under-sampled k-space reconstruction. Our main methodological contribution is the addition of a detection network to classify motion-corrupted k-space lines to convert the problem of artefact correction to a problem of reconstruction using the data consistency term. We train our network to automatically correct for motion-related artefacts using synthetically corrupted cine CMR k-space data as well as uncorrupted CMR images. Using a test set of 50 2D+time cine CMR datasets from the UK Biobank, we achieve good image quality in the presence of synthetic motion artefacts. We quantitatively compare our method with a variety of techniques for recovering good image quality and showcase better performance compared to state of the art denoising techniques with a PSNR of 37.1. Moreover, we show that our method preserves the quality of uncorrupted images and therefore can be also utilized as a general image reconstruction algorithm.

Orijinal dilİngilizce
Ana bilgisayar yayını başlığıMedical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
EditörlerDinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou
YayınlayanSpringer Science and Business Media Deutschland GmbH
Sayfalar695-703
Sayfa sayısı9
ISBN (Basılı)9783030322502
DOI'lar
Yayın durumuYayınlandı - 2019
Harici olarak yayınlandıEvet
Etkinlik22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 - Shenzhen, China
Süre: 13 Eki 201917 Eki 2019

Yayın serisi

AdıLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Hacim11767 LNCS
ISSN (Basılı)0302-9743
ISSN (Elektronik)1611-3349

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???event.eventtypes.event.conference???22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019
Ülke/BölgeChina
ŞehirShenzhen
Periyot13/10/1917/10/19

Bibliyografik not

Publisher Copyright:
© Springer Nature Switzerland AG 2019.

Finansman

Acknowledgments. This work was supported by an EPSRC programme Grant (EP/P001009/1) and the Wellcome EPSRC Centre for Medical Engineering at the School of Biomedical Engineering and Imaging Sciences, King’s College London (WT 203148/Z/16/Z). This research has been conducted using the UK Biobank Resource under Application Number 17806. The GPU used in this research was generously donated by the NVIDIA Corporation. This work was supported by an EPSRC programme Grant (EP/P001009/1) and the Wellcome EPSRC Centre for Medical Engineering at the School of Biomedical Engineering and Imaging Sciences,King?s College London (WT 203148/Z/16/Z). This research has been conducted using the UK Biobank Resource under Application Number 17806. The GPU used in this research was generously donated by the NVIDIA Corporation.

FinansörlerFinansör numarası
King?s College London17806
Wellcome EPSRC
Wellcome EPSRC Centre for Medical Engineering at the School of Biomedical Engineering and Imaging Sciences
King’s College LondonWT 203148/Z/16/Z
Engineering and Physical Sciences Research CouncilEP/P001009/1

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