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X-ray crystallographic and hydrogen deuterium exchange studies confirm alternate kinetic models for homolog insulin monomers

  • Esra Ayan*
  • , Miray Türk
  • , Özge Tatlı
  • , Sevginur Bostan
  • , Elek Telek
  • , Baran Dingiloğlu
  • , B. Züleyha Doğan
  • , Muhammed Ikbal Alp*
  • , Ahmet Katı
  • , Gizem Dinler-Doğanay
  • , Hasan Demirci
  • *Corresponding author for this work
  • Koc University
  • University of Health Sciences
  • Istanbul Medipol University
  • Istanbul Technical University
  • Lund University
  • Istanbul Medeniyet University
  • University of Pecs
  • SLAC National Accelerator Laboratory

Research output: Contribution to journalArticlepeer-review

4 Citations (Scopus)

Abstract

Despite the crucial role of various insulin analogs in achieving satisfactory glycemic control, a comprehensive understanding of their in-solution dynamic mechanisms still holds the potential to further optimize rapid insulin analogs, thus significantly improving the well-being of individuals with Type 1 Diabetes. Here, we employed hydrogen-deuterium exchange mass spectrometry to decipher the molecular dynamics of newly modified and functional insulin analog. A comparative analysis of H/D dynamics demonstrated that the modified insulin exchanges deuterium atoms faster and more extensively than the intact insulin aspart. Additionally, we present new insights derived from our 2.5 Å resolution X-ray crystal structure of modified hexamer insulin analog at ambient temperature. Furthermore, we obtained a distinctive side-chain conformation of the Asn3 residue on the B chain (AsnB3) by operating a comparative analysis with a previously available cryogenic rapid-acting insulin structure (PDB_ID: 4GBN). The experimental conclusions have demonstrated compatibility with modified insulin’s distinct cellular activity, comparably to aspart. Additionally, the hybrid structural approach combined with computational analysis employed in this study provides novel insight into the structural dynamics of newly modified and functional insulin vs insulin aspart monomeric entities. It allows further molecular understanding of intermolecular interrelations driving dissociation kinetics and, therefore, a fast action mechanism.

Original languageEnglish
Article numbere0319282
JournalPLoS ONE
Volume20
Issue number4 APRIL
DOIs
Publication statusPublished - Apr 2025

Bibliographical note

Publisher Copyright:
© 2025 Ayan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

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