Abstract
In this study, the mechanism of CuAAC reaction and the structure of copper acetylides have been investigated with quantum mechanical methods, namely B3LYP/6-311 + G(d,p). A series of possible copper-acetylide species which contain up to four copper atoms and solvent molecules as ligand has been evaluated and a four-copper containing copper-acetylide, M1A, was proposed more likely to form based on its thermodynamic stability. The reaction has been modeled with a representative simple alkyne and a simple azide to concentrate solely on the electronic effects of the mechanism. Later, the devised mechanism has been applied to a real system, namely to the reaction of 2-azido-1,1,1-trifluoroethane and ethynylbenzene in the presence of copper. The copper catalyst transforms the concerted uncatalyzed reaction to a stepwise process and lowers the activation barrier. The pre-reactive complexation of the negatively charged secondary nitrogen of azide and the positively charged copper of copper-acetylide brings the azide and the alkyne to a suitable geometry for cycloaddition to take place. The calculated activation barrier difference between the catalyzed and the uncatalyzed reactions is consistent with faster and the regioselective synthesis of triazole product.
| Original language | English |
|---|---|
| Pages (from-to) | 101-107 |
| Number of pages | 7 |
| Journal | Journal of Molecular Graphics and Modelling |
| Volume | 34 |
| DOIs | |
| Publication status | Published - Apr 2012 |
Funding
This research was made possible by the TÜBİTAK 109T251 project, National Center for High Performance Computing (Grant number: 10732009 ) and TUBITAK ULAKBIM, High Performance and Grid Computing Center (TR-Grid e-Infrastructure).
| Funders | Funder number |
|---|---|
| High Performance and Grid Computing Center | |
| TUBITAK ULAKBIM | |
| TÜBİTAK | 109T251, 10732009 |
Keywords
- Click chemistry
- Copper-acetylide
- Copper-catalyst
- CuAAC
- DFT
- Triazole