Abstract
B3LYP/6-31++G** has been used to model the conformers of glycine, protonated glycine, the unimolecular fragmentation, the proton transfer and the bimolecular proton exchange reactions with NH3. B3LYP/6-31++G** has located all the conformers - except one - located previously with electron correlation methods. The results show that the performance of B3LYP/6-31++G** is significantly better than that of the HF method and in most cases as good as the ab initio theories such as MP2, CCSD, and CISD. We have thus used B3LYP/6-31++G** in order to understand the unimolecular fragmentation and bimolecular reactions of glycine with NH3. The proton has been found to be mobile over all basic sites when a threshold of ~33 kcal/mol is reached. A barrier of ~50 kcal/mol exists for the fragmentation reaction, H2O and CO being sequentially eliminated. The amino protons are exchanged with an onium mechanism and the carboxylic proton is exchanged via a salt bridge complex. (C) 2000 Elsevier Science B.V.
Original language | English |
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Pages (from-to) | 69-85 |
Number of pages | 17 |
Journal | International Journal of Mass Spectrometry |
Volume | 201 |
Issue number | 1-3 |
DOIs | |
Publication status | Published - 2000 |
Externally published | Yes |
Funding
This research was supported by the Boğaziçi University Araştırma Fonu (project no. 99B504D) and by The Israel Science Foundation founded by the Israel Academy of Sciences and Humanities. The Farkas Research Center is supported by the Minerva Gesellschaft für die Forschung GmbH, München.
Funders | Funder number |
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Boğaziçi University Araştırma Fonu | 99B504D |
Minerva Gesellschaft für die Forschung GmbH | |
Israel Academy of Sciences and Humanities | |
Israel Science Foundation |
Keywords
- Conformers
- DFT
- Fragmentation
- H/D exchange
- Potential energy profiles
- Proton migration
- Protonated glycine