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Local2Global: UNet with Hierarchical Attention Mechanisms for Improved MR Image Inpainting

  • New York University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

The BraTS Inpainting Challenge aims to synthesize healthy brain tissue to replace tumor-affected regions, which are localized with masks, on 3D magnetic resonance imaging. This effort supports clinical and research applications by generating anatomically plausible reconstructions. In this paper, we propose Local2Global, a novel UNet-like architecture combining convolutional and multiple attention mechanisms to synthesize anatomically coherent healthy brain tissue. Our model comprises four encoder stages, where each stage is designed to progressively capture distinct levels of context from local patterns with the convolution stage to global context with full attention. This local-to-global strategy enables the network to leverage the advantages of each layer type while reducing the computational burden associated with processing 3D volumes. Experimental results on the BraTS Inpainting dataset demonstrate the effectiveness of our approach. The proposed model was evaluated during the challenge. Our model achieved an SSIM of 0.768 and a PSNR of 20.548 on the validation set, whereas an SSIM of 0.844 and a PSNR of 21.954 on the testing set. The code is available on https://github.com/ThEnded32/Local2Global.

Original languageEnglish
Title of host publicationSegmentation, Classification, and Synthesis for Brain Tumors and Traumatic Brain Injuries - MICCAI 2025 Challenges
Subtitle of host publicationBraTS-Lighthouse 2025 and AIMS-TBI 2025, Held in Conjunction with MICCAI 2025, Proceedings
EditorsSpyridon Bakas, Emily Dennis, Mehdi Astaraki, Ujjwal Baid, Gian Marco Conte, Martha Foltyn-Dumitru, Zhifan Jiang, Marius George Linguraru, Dominic Labella, Marie-Christin Metz, Udunna Anazodo, Maria Correia de Verdier, Florian Kofler, Hongwei Bran Li, Nazanin Maleki
PublisherSpringer Science and Business Media Deutschland GmbH
Pages110-122
Number of pages13
ISBN (Print)9783032163691
DOIs
Publication statusPublished - 2026
EventBrain TumorS Lighthouse Cluster of Challenges, and the Automated Identification of Moderate-Severe Traumatic Brain Injury Lesions Challenge, BraTS 2025 and AIMS-TBI 2025, held in Conjunction International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025 - Daejeon, Korea, Republic of
Duration: 23 Sept 202527 Sept 2025

Publication series

NameLecture Notes in Computer Science
Volume16377 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

ConferenceBrain TumorS Lighthouse Cluster of Challenges, and the Automated Identification of Moderate-Severe Traumatic Brain Injury Lesions Challenge, BraTS 2025 and AIMS-TBI 2025, held in Conjunction International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025
Country/TerritoryKorea, Republic of
CityDaejeon
Period23/09/2527/09/25

Bibliographical note

Publisher Copyright:
© The Author(s), under exclusive license to Springer Nature Switzerland AG 2026.

Keywords

  • Attention
  • Convolution
  • Inpainting
  • Transformer
  • UNet

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