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Inter-vendor performance of deep learning in segmenting acute ischemic lesions on diffusion-weighted imaging: a multicenter study

  • Deniz Alis*
  • , Mert Yergin
  • , Ceren Alis
  • , Cagdas Topel
  • , Ozan Asmakutlu
  • , Omer Bagcilar
  • , Yeseren Deniz Senli
  • , Ahmet Ustundag
  • , Vefa Salt
  • , Sebahat Nacar Dogan
  • , Murat Velioglu
  • , Hakan Hatem Selcuk
  • , Batuhan Kara
  • , Ilkay Oksuz
  • , Osman Kizilkilic
  • , Ercan Karaarslan
  • *Corresponding author for this work
  • Acibadem Mehmet Ali Aydinlar Universitesi
  • Bahcesehir University
  • Istanbul University - Cerrahpaşa
  • Istanbul Mehmet Akif Ersoy Thoracic and Cardiovascular Surgery Training and Research Hospital
  • Istanbul Silivri State Hospital
  • Istanbul Gaziosmanpasa Training and Research Hospital
  • Istanbul Fatih Sultan Mehmet Training and Research Hospital
  • Istanbul Bakırköy Sadi Konuk Training and Research Hospital

Research output: Contribution to journalArticlepeer-review

21 Citations (Scopus)

Abstract

There is little evidence on the applicability of deep learning (DL) in the segmentation of acute ischemic lesions on diffusion-weighted imaging (DWI) between magnetic resonance imaging (MRI) scanners of different manufacturers. We retrospectively included DWI data of patients with acute ischemic lesions from six centers. Dataset A (n = 2986) and B (n = 3951) included data from Siemens and GE MRI scanners, respectively. The datasets were split into the training (80%), validation (10%), and internal test (10%) sets, and six neuroradiologists created ground-truth masks. Models A and B were the proposed neural networks trained on datasets A and B. The models subsequently fine-tuned across the datasets using their validation data. Another radiologist performed the segmentation on the test sets for comparisons. The median Dice scores of models A and B were 0.858 and 0.857 for the internal tests, which were non-inferior to the radiologist’s performance, but demonstrated lower performance than the radiologist on the external tests. Fine-tuned models A and B achieved median Dice scores of 0.832 and 0.846, which were non-inferior to the radiologist's performance on the external tests. The present work shows that the inter-vendor operability of deep learning for the segmentation of ischemic lesions on DWI might be enhanced via transfer learning; thereby, their clinical applicability and generalizability could be improved.

Original languageEnglish
Article number12434
JournalScientific Reports
Volume11
Issue number1
DOIs
Publication statusPublished - Dec 2021

Bibliographical note

Publisher Copyright:
© 2021, The Author(s).

Funding

Ilkay Oksuz has been benefiting from the 2232 International Fellowship for Outstanding Researchers Program of TUBITAK (Project No: 118C353). However, the entire responsibility of the publication/paper belongs to the owner of the paper. The financial support received from TUBITAK does not mean that the content of the publication is approved in a scientific sense by TUBITAK.

FundersFunder number
TUBITAK118C353

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