Beyin Damar Bölütlemesinde Derin Sinir Aglarmm Deneysel Karçilaçtinlmasi

Translated title of the contribution: Empirical Comparison of Deep Neural Networks for Brain Vessel Segmentation

Tugçe Koçak, Musa Aydin, Berna Kiraz

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

4 Citations (Scopus)

Abstract

Examination, monitoring and analysis of structural changes in the blood vessels of the brain enable the observation of brain functions. Therefore, the segmentation of the entire cerebral vascular network (including the capillaries) is of great importance in terms of the relevant specialist's opinion on the diagnosis and treatment of a disease. When performed manuali, segmentation of the vascular network of the brain is a long time-consuming and fault-tolerant process. The automatic segmentation of the brain microvascular structure with machine learning approaches eliminates the need for specialists, and provides a method for perfroming cerebral vessel segmentation in a short time. This study provides the empirical comparision of three different deep neural network models including autoencoder, U-Net and ResNet+U-Net for the vascular network segmentation of brain vessels. The experiments are conducted on vesseINN dataset, which is a volumetric cerebrovascular system dataset obtained by two-photon microscopy. The models are evaluated based on accuracy, fl-score, recall, and precision metrics. During the training phase, U-Net and ResNet+Unet achieve 98% accuracy. Auto-encoder, on the other hand, yields 95% accuracy. In the test phase, it is observed that U-Net and ResNet+U-Net models give better results than the autoencoder model, according to the results obtained with 97% accuracy for U-Net and ResNet+Unet networks and 95% accuracy for autoencoder.

Translated title of the contributionEmpirical Comparison of Deep Neural Networks for Brain Vessel Segmentation
Original languageTurkish
Title of host publicationProceedings - 6th International Conference on Computer Science and Engineering, UBMK 2021
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages751-756
Number of pages6
ISBN (Electronic)9781665429085
DOIs
Publication statusPublished - 2021
Externally publishedYes
Event6th International Conference on Computer Science and Engineering, UBMK 2021 - Ankara, Turkey
Duration: 15 Sept 202117 Sept 2021

Publication series

NameProceedings - 6th International Conference on Computer Science and Engineering, UBMK 2021

Conference

Conference6th International Conference on Computer Science and Engineering, UBMK 2021
Country/TerritoryTurkey
CityAnkara
Period15/09/2117/09/21

Bibliographical note

Publisher Copyright:
© 2021 IEEE

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